Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015844492.1_cds_XP_016509042.1_22005
CDS Infomation

[gene=LOC107826567] [db_xref=GeneID:107826567] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like] [protein_id=XP_016509042.1] [location=complement(join(23759..23779,23999..24073,24530..24933,25774..25999,26092..26181,26382..26481,26595..26644,26737..26838,26929..27006,27116..27382,27501..27600,28016..28319,29499..29532))] [gbkey=CDS]
Sequence

ATGTCGGGTCCGTTAGATCGGTTTGCTAGGCCTTGCTTTGAGGGTTCATCTGCACGTGAA
GAGAGAAGGGAAAGAAAATCTGATTTTGAGAATTCAGAGGATGAGAGGAGGACGAGAATT
GGTTCCCTGAAAAAGAAAGCACTGAATGCATCAACAAAATTCAAACATTCTCTCAAGAAG
AAAAATAGTAGAAGAAAAAGCGATGGACGAGTGAGCTCAGTTTCCATCGAGGATATTCGG
GATGCTGAGGAGCTACAGGCTGTTGATCAGTTTAGGCAAGCATTACTTTTGGATGAGCTG
TTACCAGAGAGACATGATGACTACTATATGATGTTGAGGTTCTTAAAAGCAAGGAAGTTT
GACATCGAGAAAGCGAAGCACATGTGGGCTGATATGATTCAGTGGAGGAAGGATTTTGGG
GCTGACACGATTACGGAGGAGTTTGAATTCCCAGAGATGGACGAAGTTGTAAAACATTAT
CCCCAAGGTTATCATGGGATTGATAAGGAGGGTAGACCAGTGTACATTGAAAGACTAGGG
AAAGTTGATCCTACCAAACTCATGCAAGTCACAACCATGGATCGTTATATAAAATACCAC
GTACGAGAGTTCGAGAAAACCTTTATGATTAAGTTTCCAGCTTGTACAATAGCCGCAAAA
AGGCAGATCGATTCAAGCACGACCATTTTGGATGTTCAGGGAGTGGGCTTGAAAAACTTT
AGCAAGAGTGCAAGGGAGCTTATTATGCGGCTCCAGAAGATTGATGGTGATAATTATCCC
GAGACTCTTCATCAGATGTTCATAATCAATGCTGGACCTGGGTTTAGGCTCCTTTGGAAC
ACGGTTAAGAGTTTTCTGGACCCGAAGACAGCCTCCAAAATACATGTTCTAGGGAACAAG
TACCAGAACAAATTGCTTGAAATAATTGATGCTAGTGAGTTGCCCGAGTTCCTAGGTGGT
ACCTGTACATGTGCAGGCCGAGGGGGTTGCATGCGTTCGGATAAAGGGCCATGGCAAAAT
CCAGATATACTAAAGATGATTGGTGAAGCACGGCGTGCCAAACAGCTTGTTAAAGTTCTA
AATAGTGAAGGGAAGGTAGTTTATGCTAAGCCTCGCTATCCAACGGTAAAAGGTAGTAGT
GACACCTCTACTGCAGAATCTGGATCTGAAGCTGAAGATATTGCTTCCCCAAAAGCTGTA
AGGAGTTATTCACATCTTCGGCTTACTCCTGTCCGAGAAGAGGTATACCTGTCCGTTTTC
ACTCAATTTCATGAGGTGGCTTTTCTTTTATTGAAAGGATTCGACTGGACATCACTTGAC
AAAAAAGACCGTCTTACGTCAAACTGCGGCTCGATACTTCCACCAGCGGACTCTCAAAAA
CCTGTAGAAGGTCTTCGTGCTCGAGTTATAGGACTTTTTATGGCCTTCTTCATGACGGTG
TTGATGCTTTTCCGCTCAGTTACATGCCATGTAACCAAGAAATTACAAGATTCATCGACT
GTTGAAGACCAAGCTGGTCAAGAATTTACTTTTGATGCTAGCGCTAAAGAGGAGTTTCGG
CCCCCTTCACCTATTCCAGCTTTTACAGAAGCTCAACTACTCTCCGTTGTTCTCAAGAGA
TTGGGTGAACTTGAAGACAAAGTAAATACGCTTCAAGAAAAGCCATCTGAGATGCCTTAT
GAGAAAGAGGAATTGCTAAATGCAGCAGTTTGCCGAGTGGATGCCCTAGAAGCTGAGTTA
ATAGCAACCAAGAAGGCATTGCATGAGGCTTTGATGAGGCAAGAGGAACTTCTTGCTTAC
ATTGATGGTCAAGAAGCTGCCAAGTTCCGGAAAAAGAAGTTTTGCTTTTAA

Peptide Sequence

PEP ID

XP_016509042.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like [Nicotiana tabacum]
Sequence

MSGPLDRFARPCFEGSSAREERRERKSDFENSEDERRTRIGSLKKKALNASTKFKHSLKK
KNSRRKSDGRVSSVSIEDIRDAEELQAVDQFRQALLLDELLPERHDDYYMMLRFLKARKF
DIEKAKHMWADMIQWRKDFGADTITEEFEFPEMDEVVKHYPQGYHGIDKEGRPVYIERLG
KVDPTKLMQVTTMDRYIKYHVREFEKTFMIKFPACTIAAKRQIDSSTTILDVQGVGLKNF
SKSARELIMRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTASKIHVLGNK
YQNKLLEIIDASELPEFLGGTCTCAGRGGCMRSDKGPWQNPDILKMIGEARRAKQLVKVL
NSEGKVVYAKPRYPTVKGSSDTSTAESGSEAEDIASPKAVRSYSHLRLTPVREEVYLSVF
TQFHEVAFLLLKGFDWTSLDKKDRLTSNCGSILPPADSQKPVEGLRARVIGLFMAFFMTV
LMLFRSVTCHVTKKLQDSSTVEDQAGQEFTFDASAKEEFRPPSPIPAFTEAQLLSVVLKR
LGELEDKVNTLQEKPSEMPYEKEELLNAAVCRVDALEAELIATKKALHEALMRQEELLAY
IDGQEAAKFRKKKFCF

Transcript Sequence

Gene sequence data has not been registered.